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Fix bugs with restrictions

Deepak Unnirequested to merge
fix-bugs-with-restrictions into branch-for-logging

This PR addresses some of the issues as reported by Katie:

  • collection name for named individuals was being malformed due to a bug in how the names are parsed (fixed via 4690b6)
  • nested restrictions were not being serialized into the project schema TTL due to a bug (fixed via 40dcde)

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