From a1521bac3e576934f1bf70279c0023ba92db9ad5 Mon Sep 17 00:00:00 2001
From: Nicola Stoira <nicola.stoira@accenture.com>
Date: Tue, 11 Feb 2025 15:31:50 +0100
Subject: [PATCH 1/2] Update rmlmapper access token
---
connector/Dockerfile | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/connector/Dockerfile b/connector/Dockerfile
index 211f13ed..70d0ff05 100644
--- a/connector/Dockerfile
+++ b/connector/Dockerfile
@@ -92,7 +92,7 @@ RUN git clone https://git.dcc.sib.swiss/sphn-semantic-framework/sphn-schema-doc.
&& rm -rf ${SPARQLER}
WORKDIR ${CONVERSION_TMP}
-RUN git clone https://sphn-connector:glpat-yTXoXVTygbaK1vgHbnTH@git.dcc.sib.swiss/hospfair/rmlmapper-java.git ${CONVERSION_TMP}/ \
+RUN git clone https://sphn-connector-2025:glpat-iLqsCBKtWGsZhrsS3zxW@git.dcc.sib.swiss/hospfair/rmlmapper-java.git ${CONVERSION_TMP}/ \
&& git checkout c100f6a7b6440682434238f55c9068174d7c3187 \
&& mvn install -DskipTests=true -P no-buildnumber \
&& mkdir -p ${CONVERSION} \
--
GitLab
From 06bb624f449c7983b2efb25d9b21248524a67d57 Mon Sep 17 00:00:00 2001
From: Nicola Stoira <nicola.stoira@accenture.com>
Date: Tue, 11 Feb 2025 16:16:43 +0100
Subject: [PATCH 2/2] Revert pyoxigraph update (due to structural changed in
bulk_load method)
---
api/app/requirements.txt | 2 +-
connector/app/requirements.txt | 2 +-
pyproject.toml | 2 +-
3 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/api/app/requirements.txt b/api/app/requirements.txt
index 5c8f3d3d..721e89a4 100644
--- a/api/app/requirements.txt
+++ b/api/app/requirements.txt
@@ -17,6 +17,6 @@ lightrdf==0.3.1
openpyxl==3.1.5
anyio==4.8.0
psutil==5.9.8
-pyoxigraph==0.4.7
+pyoxigraph==0.3.22
boto3==1.36.17
setuptools==71.1.0
\ No newline at end of file
diff --git a/connector/app/requirements.txt b/connector/app/requirements.txt
index 2dd042e4..07bf5b6e 100644
--- a/connector/app/requirements.txt
+++ b/connector/app/requirements.txt
@@ -8,7 +8,7 @@ rdflib==6.1.1
aiohttp==3.11.12
Werkzeug==2.2.3
cryptography==43.0.3
-pyoxigraph==0.4.7
+pyoxigraph==0.3.22
pydantic==1.10.21
boto3==1.36.17
sqlparse==0.5.3
diff --git a/pyproject.toml b/pyproject.toml
index f24bba0c..65e5bd1d 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -19,7 +19,7 @@ passlib = "^1.7.4"
rfc3987 = "^1.3.8"
lightrdf = "^0.3.1"
openpyxl = "^3.1.2"
-pyoxigraph="^0.4.0"
+pyoxigraph="^0.3.20"
[build-system]
requires = ["poetry-core"]
--
GitLab